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For the records, it would not be seconds specifically, but X values in general.
Here’s a snippet that makes the gapSize apply to absolute X values (meaning milliseconds in our case): http://jsfiddle.net/highcharts/wado3rku/
If we implement this in the core, it should probably be called gapValues or gapSizeAbsolute, but we need to check how it works with an ordinal axis.
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NarodMon Project
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Unfortunately such variant does not suit us, because the interval between points on the X-axis can be variable and can be interrupted at any time interval. Our goal is to initiate a rupture, if the interval exceeds 1 hour. Intervals more than 1 hour there may be several on one chart.
We partially solved the problem by addition of a point with Y = null immediately before the gap size more than 1 hour, but on the bottom graph in HighStock Chart, it unfortunately has no effect.